Phenotyping#
Phenomenal#
3D reconstruction from high-throughput plant phenotyping images
Plant high-throughput phenotyping aims at capturing the genetic variability of plant response to environmental factors for thousands of plants, hence identifying heritable traits for genomic selection and predicting the genetic values of allelic combinations in different environments.
Authors : Simon Artzet, Christian Fournier, Christophe Pradal, Nicolas Brichet, Jerome Chopard, Michael Mielewczik
Institutes : INRA, Cirad
Source Code : Github
EarTrack#
EarTrack is an imaging library to detect and track future position of ears on maize plants
Authors : Nicolas Brichet, Christian Fournier, Simon Artzet, Christophe Pradal,
Institutes : INRA, Cirad
Citation : Brichet et al., 2017, https://doi.org/10.1186/s13007-017-0246-7
Source Code : Github
Strawberry#
Strawberry architecture and visualization
- Strawberry package enables :
Analyses on strawberry architecture at several levels.
Modelize strawberry in 2 or 3d.
Authors : Marc Labadie, Christophe Pradal, Gaetan Heidsieck
Institutes : Cirad, Inria
Source Code : Github